g2nb hosts a variety of tools and data sources that provide a wide scope of genomic analysis and bioinformatics capabilities.

Tool Description How to access in g2nb
Galaxy The Galaxy project is an open, web-based platform for performing accessible, reproducible, and transparent biomedical research. Complete computational analyses can be built, saved, rerun, modified, and shared.  Tool Panel
GenePattern GenePattern is a powerful genomic analysis platform that provides access to hundreds of tools for gene expression analysis, proteomics, SNP analysis, flow cytometry, RNA-seq analysis, and common data processing tasks.  Tool Panel

Cytoscape (Jupyter widget)

Cytoscape is an open-source bioinformatics software platform for visualizing molecular interaction networks and biological pathways, and integrating these networks with annotations, gene expression profiles, and other state data. Tool Panel

IGV (igv-notebook)

The Integrative Genomics Viewer (IGV) is a lightweight, high-performance visualization tool that enables intuitive real-time exploration of diverse, large-scale genomic data sets. It supports flexible integration of a wide variety of data types. Users can zoom and pan seamlessly across the genome at any level of detail from whole genome to base pair. Tool Panel
NDEx The NDEx Project provides an open source framework where scientists and organizations can share, store, manipulate, and publish biological network knowledge.  import ndex2
Globus With Globus, subscribers can move, share, and discover data via a single interface – whether your files live on a supercomputer, lab cluster, tape archive, public cloud or your laptop, you can manage this data from anywhere, using your existing identities, via just a web browser. Documentation Right-click a file in Files panel and select "Initiate Globus Transfer"